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publications [2023/01/31 09:45] – created davidpublications [2023/10/13 10:48] (current) – patty
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 ====== Research Publications ====== ====== Research Publications ======
 ^ #  ^ Authors    ^ Year          ^   Title   ^ PDF ^ Notes ^ ^ #  ^ Authors    ^ Year          ^   Title   ^ PDF ^ Notes ^
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 |~~=row()~~.| Baslan, T., Kendall, J., Volyanskyy, K., McNamara, K., Cox, H., D’Italia, S., Ambrosio, F., Riggs, M., Rodgers, L., Leotta, A., Song, J., Mao, Y., Wu, J., Shah, R.,  Merida, R.G., Chadalavada, K., Nanjangud, G., Varadan, V., Gordon, A., Curtis, C., Krasnitz, A., Dimitrova, N., Harris, L., Wigler, M., and Hicks, J. |2020| Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing. eLife Science, 9: 51480. | {{: Baslan_et_al_eLife_2020.pdf.|PDF}} | |~~=row()~~.| Baslan, T., Kendall, J., Volyanskyy, K., McNamara, K., Cox, H., D’Italia, S., Ambrosio, F., Riggs, M., Rodgers, L., Leotta, A., Song, J., Mao, Y., Wu, J., Shah, R.,  Merida, R.G., Chadalavada, K., Nanjangud, G., Varadan, V., Gordon, A., Curtis, C., Krasnitz, A., Dimitrova, N., Harris, L., Wigler, M., and Hicks, J. |2020| Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing. eLife Science, 9: 51480. | {{: Baslan_et_al_eLife_2020.pdf.|PDF}} |
 |~~=row()~~.| Vasudevan, A., Baruah, P.S., Smith, J.C., Wang, Z., Sayles, N.M., Andrews, P., Kendall, J., Leu, J., Chunduri, N.K., Levy, D., Wigler, M., Storchová, Z., Sheltzer, J.M. |2020| Single-Chromosomal Gains Can Function as Metastasis Suppressors and Promoters in Colon Cancer. Dev Cell. 4: 413-428.e6. | {{:Vasudevan_et_al_developmental_cell_2020.pdf|PDF}} | |~~=row()~~.| Vasudevan, A., Baruah, P.S., Smith, J.C., Wang, Z., Sayles, N.M., Andrews, P., Kendall, J., Leu, J., Chunduri, N.K., Levy, D., Wigler, M., Storchová, Z., Sheltzer, J.M. |2020| Single-Chromosomal Gains Can Function as Metastasis Suppressors and Promoters in Colon Cancer. Dev Cell. 4: 413-428.e6. | {{:Vasudevan_et_al_developmental_cell_2020.pdf|PDF}} |
-|~~=row()~~.| Miyabayashi, K, Baker, LA, Deschênes, A,Traub, B, Caligiuri, G, Plenker, D, Alagesan, B, Belleau, P, Li, S, Kendall, J, Jang, GH, Kawaguchi, RK, Somerville, TDD, Tiriac, H, Hwang, CI, Burkhart, RA, Roberts, NJ, Wood, LD, Hruban, RH, Gillis, J, Krasnitz, A, Vakoc, CR, Wigler, M. Notta, F, Gallinger, S, Park, Y, Tuveson, DA. |2020| Intraductal Transplantation Models of Human Pancreatic Ductal Adenocarcinoma Reveal Progressive Transition of Molecular Subtypes. Cancer Discovery, 10: 1566-1589.  PMCID:  PMC7664990  |  {{:Miyabayashi_et_al_cancer_discovery_2020.pdf|PDF}} |+|~~=row()~~.| Miyabayashi, K, Baker, LA, Deschênes, A,Traub, B, Caligiuri, G, Plenker, D, Alagesan, B, Belleau, P, Li, S, Kendall, J, Jang, GH, Kawaguchi, RK, Somerville, TDD, Tiriac, H, Hwang, CI, Burkhart, RA, Roberts, NJ, Wood, LD, Hruban, RH, Gillis, J, Krasnitz, A, Vakoc, CR, Wigler, M. Notta, F, Gallinger, S, Park, Y, Tuveson, DA. |2020| Intraductal Transplantation Models of Human Pancreatic Ductal Adenocarcinoma Reveal Progressive Transition of Molecular Subtypes. Cancer Discovery, 10: 1566-1589.  PMCID:  PMC7664990  | {{:Miyabayashi_et_al_cancer_discovery_2020.pdf|PDF}} |
 |~~=row()~~.| Yoon S, Munoz A, Yamrom B, Lee Y-h, Andrews P, Marks S, Wang Z, Reeves C, Winterkorn L, Krieger AM, Buja, A, Pradhan K. Ronemus M, Baldwin KK, Levy D, Wigler M, Iossifov I. |2021| Rates of contributory de novo mutation in high and low risk autism families. Nature Communications Biology, 4: 1026.  PMCID:  PMC8410909 | {{:Yoon_et_al_commun_biol_2021.pdf|PDF}} | |~~=row()~~.| Yoon S, Munoz A, Yamrom B, Lee Y-h, Andrews P, Marks S, Wang Z, Reeves C, Winterkorn L, Krieger AM, Buja, A, Pradhan K. Ronemus M, Baldwin KK, Levy D, Wigler M, Iossifov I. |2021| Rates of contributory de novo mutation in high and low risk autism families. Nature Communications Biology, 4: 1026.  PMCID:  PMC8410909 | {{:Yoon_et_al_commun_biol_2021.pdf|PDF}} |
 |~~=row()~~.| Li S, Park S, Ye C, Danyko C, Wroten M, Andrews P, Wigler M, and Levy D. |2022| Targeted de novo phasing and long-range assembly by template mutagenesis.  Nucleic Acids Research, 50: e103.  PMCID: PMC9561374 | {{: Li_et_al_NAR_2022.pdf|PDF}} | |~~=row()~~.| Li S, Park S, Ye C, Danyko C, Wroten M, Andrews P, Wigler M, and Levy D. |2022| Targeted de novo phasing and long-range assembly by template mutagenesis.  Nucleic Acids Research, 50: e103.  PMCID: PMC9561374 | {{: Li_et_al_NAR_2022.pdf|PDF}} |
 |~~=row()~~.| Wang Z, Moffitt A, Andrews P, Wigler M, Levy D. |2022| Accurate measurement of microsatellite length by disrupting its tandem repeat structure.  Nucleic Acids Research 50: e116. PMC9723644 | {{:Wang_et_al_NAR_2022.pdf|PDF}} |  |~~=row()~~.| Wang Z, Moffitt A, Andrews P, Wigler M, Levy D. |2022| Accurate measurement of microsatellite length by disrupting its tandem repeat structure.  Nucleic Acids Research 50: e116. PMC9723644 | {{:Wang_et_al_NAR_2022.pdf|PDF}} | 
-|~~=row()~~.| Li S, Alexander J, Kendall J, Andrews P, Rose E, Orjuela H, Park S, Podszus C, Shanley L, Ma R, Rishi A, Donoho DL, Goldberg GL, Levy D, and Wigler M. |2022| High-throughput single-nucleus hybrid sequencing reveals genome-transcriptome correlations in cancer.  In progress. |+|~~=row()~~.| Wroten M, Yoon S, Andrews P, Yamrom B, Ronemus M, Buja A, Krieger AM, Levy D, Ye K, Wigler M, and Iossifov I. |2023| Sharing parental genomes by siblings concordant or discordant for autism. Cell Genomics 3: 100319. PMCID: PMC10300587 | {{:Wroten_et_al_Cell_Genomics_2023.pdf|PDF}} |  
 +|~~=row()~~.| Li S, Alexander J, Kendall J, Andrews P, Rose E, Orjuela H, Park S, Podszus C, Shanley L, Ma R, Rishi A, Donoho DL, Goldberg GL, Levy D, and Wigler M. |2023| High-throughput single-nucleus hybrid sequencing reveals genome-transcriptome correlations in cancer.  In progress. |
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publications.1675176347.txt.gz · Last modified: 2023/01/31 09:45 by david
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